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DNBSEQ自主平台植物研究发表文章

物种 文献名称 期刊 发表年份
SAV-CoV-2 Genomic epidemiology of a densely sampled COVID19 outbreak in China Virus Evolution 2021
strain BY4742 Disome-seq reveals widespread ribosome collisions that promote cotranslational protein folding Genome Biology 2021
大肠杆菌 Genome recombination-mediated tRNA up-regulation conducts general antibiotic resistance of bacteria at early stage Frontiers in Microbiology 2021
植物乳杆菌 Lactobacillus Plantarum 299v Changes miRNA Expression in the Intestines of Piglets and Leads to Downregulation of LITAF by Regulating ssc-miR-450a Probiotics and Antimicrobial Proteins 2021
SAV-CoV-2 Population Bottlenecks and Intra-host Evolution during Human-to-Human Transmission of SARS-CoV-2Population Bottlenecks and Intra-host Evolution during Human-to-Human Transmission of SARS-CoV-2 Frontiers in Medicine 2021
SAV-CoV-2 Intra-host Variation and Evolutionary Dynamics of SARS-CoV-2 Population in COVID-19 Patients Genome Medicine 2021
肺孢子菌属 Genomic insights into the host specific adaptation of the Pneumocystis genus Communications Biology 2021
SARS-CoV-2 COVID-19 patient transcriptomic and genomic profiling reveals comorbidity interactions with psychiatric disorders Translational Psychiatry 2021
病毒 Establishment of a Reverse Genetic System of Severe Fever with Thrombocytopenia Syndrome Virus Based on a C4 Strain Virologica Sinica 2021
登革热 Emergence and Autochthonous Transmission of Dengue Virus Type I in a Low-Epidemic Region in Southeast China Frontiers in Cellular and Infection Microbiology 2021
绿脓杆菌 An atlas of the binding specificities of transcription factors in Pseudomonas aeruginosa directs prediction of novel regulators in virulence Elife 2021
SARS-CoV-2 Characterization of respiratory microbial dysbiosis in hospitalized COVID-19 patients Cell Discovery 2021
SARS-CoV-2 Serological investigation of asymptomatic cases of SARS-CoV-2 infection reveals weak and declining antibody responses Emerging Microbes & Infections 2021
SARS-CoV-2 Genetic Mutation of SARS-CoV-2 during Consecutive Passages in Permissive Cells Virologica Sinica 2021
微生物 Fish farm effluents as a source of antibiotic resistance gene dissemination on Jeju Island, South Korea Environmental Pollution 2021
SARS-CoV-2 RNA-induced liquid phase separation of SARS-CoV-2 nucleocapsid protein facilitates NF-κB hyper-activation and inflammation Signal Transduction and Targeted Therapy 2021
真菌 Three putative DNA methyltransferases of Verticillium dahliae differentially contribute to DNA methylation that is dispensable for growth, development and virulence Epigenetics & Chromatin  2021
镰刀菌 The Whole Genome Sequence of Fusarium redolens strain YP04, a Pathogen that Causes Root Rot of American Ginseng Phytopathology 2021
线虫 Antioxidant and reducing lipid accumulation effects of rutin in Caenorhabditis elegans BioFactors 2021
红酵母 Responses of Rhodotorula mucilaginosa under Pb(II) stress: carotenoid production and budding Environmental Microbiology 2021
病原体 Weissella confusa CGMCC 19,308 Strain Protects Against Oxidative Stress, Increases Lifespan, and Bacterial Disease Resistance in Caenorhabditis elegans Probiotics and Antimicrobial Proteins 2021
SAV-CoV-2 Time-series plasma cell-free DNA analysis reveals disease severity of COVID-19 patients Froniters in Genetics 2021
病原体 Metagenomic diagnosis of severe psittacosis using multiple sequencing platforms BMC Genomics 2021
微生物 Perspectives and benefits of high-1 throughput long-read sequencing in microbial ecology Applied and Environmental Microbiology 2021
真菌 Phosphorus deficiency in soils with red color: Insights from the interactions between minerals and microorganisms Geoderma 2021
微生物组 Cervico-vaginal microbiome dynamics after taking oral probiotics Journal of Genetics and Genomics 2021
SARS-CoV-2 Next-Generation Sequencing (NGS) in COVID-19: A Tool for SARS-CoV-2 Diagnosis, Monitoring New Strains and Phylodynamic Modeling in Molecular Epidemiology Current Issues in Molecular Biology 2021
review Metagenomic Sequencing as a Pathogen-Agnostic Clinical Diagnostic Tool for Infectious Diseases: a Systematic Review and Meta-analysis of Diagnostic Test Accuracy Studies Journal of Clinical Microbiology 2021
嗜麦芽窄食单胞菌 Comparative insights into multiple drug resistance determinants found in Stenotrophomonas maltophilia MER1 Journal of Global Antimicrobial Resistance 2021
毕赤酵母 Screening and evaluation of the strong endogenous promoters in Pichia pastoris Microbial Cell Factories 2021
腺病毒 Shell-mediated phagocytosis to reshape viral-vectored vaccine-induced immunity Biomaterials 2021
白僵菌 The Tudor Domain-Containing Protein BbTdp1 Contributes to Fungal Cell Development, the Cell Cycle, Virulence, and Transcriptional Regulation in the Insect Pathogenic Fungus Beauveria bassiana Jorunal of Clinical Microbiogy 2021
细菌 A Rickettsiella endosymbiont is a potential source of essential B-vitamins for the poultry red mite, Dermanyssus gallinae Froniters in Microbiology 2021
曲霉菌 Profiling of chromatin accessibility identifies transcription factor binding sites across the genome of Aspergillus species BMC Biology 2021
弹状病毒 First report of black currant-associated rhabdovirus in blackcurrants in Latvia Plant Disease 2021
副干酪乳杆菌 Differences in Acid Stress Response of Lacticaseibacillus paracasei Zhang Cultured from Solid-State Fermentation and Liquid-State Fermentation Microorganisms 2021
幽门螺杆菌 Glycosaminoglycan biosynthesis pathway in host genome is associated with Helicobacter pylori infection Scientific Reports 2021
宏基因组 Fusion plasmid carrying the colistin resistance gene mcr of Escherichia coli isolated from healthy residents. Journal of Global Antimicrobial Resistance 2021
核酸外切酶 Reusable and Sensitive Detection Method for Exonuclease III Activity by DNB Nanoarrays Based on cPAS Sequencing Technology Enzyme and Microbial Technology 2021
卵菌 Specific interaction of an RNA-binding protein with the 30-UTR of its target mRNA is critical to oomycete sexual reproduction PLoS Pathogens 2021
奇异变形杆菌 Novel Phage-Derived Depolymerase with Activity against
Proteus mirabilis Biofilms
Microorganisms 2021
构巢曲霉 Genome-wide analyses of light-regulated genes in Aspergillus nidulans reveal a complex interplay between different photoreceptors and novel photoreceptor functions PLoS Genetics 2021
SAV-CoV-2 Upregulation of Human Endogenous Retroviruses in Bronchoalveolar Lavage Fluid of COVID-19 Patients Microbiology Spectrum 2021
红杆菌 Population Differentiation of Rhodobacteraceae Along Coral Compartments ISME Journal 2021
肠道宏基因组 Mendelian randomization analyses support causal relationships between blood metabolites and the gut microbiome Nature Genetics 2022
真菌 Local rather than global H3K27me3 dynamics associates with differential gene expression in Verticillium dahliae mBio 2022
猪流行性腹泻 Genome-wide transcriptome analysis of porcine epidemic diarrhea virus virulent or avirulent strain-infected porcine small intestinal epithelial cells Virologica Sinica 2022
宏基因组 Life History Recorded in the Vagino-cervical Microbiome Along with Multi-omes Genomics, Proteomics & Bioinformatics 2022
宏基因组 Over 50000 metagenomically assembled draft genomes for the human oral microbiome reveal new taxa Genomics, Proteomics & Bioinformatics 2022
梭状芽孢杆菌 Complete genome sequence of Crassaminicella sp. 143-21,isolated from a deep-sea hydrothermal vent Marine Genomics 2022
磁性微生物 A Novel Isolate of Spherical Multicellular Magnetotactic Prokaryotes Has Two Magnetosome Gene Clusters and Synthesizes Both Magnetite and Greigite Crystals Microorganisms 2022
海水 Novel Chloroflexi genomes from the deepest ocean reveal metabolic strategies for the adaptation to deep-sea habitats Microbiome 2022
宏基因组 Horizontal transfer of a plasmid possessing mcr-1 marked with a single nucleotide mutation between Escherichia coli isolates from community residents. BMC Medical Research Methodology 2022
根际土壤 Rhizosphere soil microbial community and its response to different utilization patterns in the semi-arid alpine grassland of northern Tibet Frontiers in Microbiology 2022
阴道微生物 Vaginal microbiota and personal risk factors associated with HPV status conversion—A new approach to reduce the risk of cervical cancer? Plos One 2022
16S/18S/ITS扩增子 Sequencing introduced false positive rare taxa lead to biased microbial community diversity, assembly, and interaction interpretation in amplicon studies Environmental Microbiome 2022
粪便 Genomic and microbial factors affect the prognosis of anti-pd-1 immunotherapy in nasopharyngeal carcinoma Frontiers in Oncology 2022
SARS-Cov-2 Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy Nature Communication 2022
肺泡液 Genomic characterization of two metagenome-assembled genomes of Tropheryma whipplei from China Frontiers in Cellular and Infection Microbiology 2022
酵母菌株 Systematic dissection of key factors governing recombination outcomes by GCE-SCRaMbLE Nature Communication 2022
土壤真菌 Leguminous cover crops and soya increased soil fungal diversity and suppressed pathotrophs caused by continuous cereal cropping Frontiers in Microbiology 2022
黑酵母 Clonality, inbreeding, and hybridization in two extremotolerant black yeasts Gigascience 2022
谷物/土壤 GWAS, MWAS and mGWAS provide insights into precision agriculture based on genotype-dependent microbial effects in foxtail millet Nature Communications 2022
肠道宏基因组 Metagenomic Analysis of Gut Microbiome in Gout Patients with Different Chinese Traditional Medicine Treatments Evidence-Based Complementary and Alternative Medicine 2022
质粒 One Health Analysis of mcr-Carrying Plasmids and Emergence of mcr-10.1 in Three Species of Klebsiella Recovered from Humans in China Microbiology Spectrum 2022
肺炎克雷伯菌 Genome-wide association study of Klebsiella pneumoniae identifies variations linked to carbapenems resistance Frontiers in Microbiology 2022

以上为2022年DNBSEQ自主平台植物研究发表文章

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